cortex-lab / cortex-lab/phy

WaveformView displays noise

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#990 5 comments 0 reactions 1 assignee View on GitHub

@rossant is already working on this.

Since Apr 3, 2020.

area: visualization status: confirmed type: bug
Dominant language
Python
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Description

Hi,

Phy WaveformView displays weird (line) noise in each cluster. I first thought that my data is screwed up or it is the problem of referencing (reference to the tip of Neuropixels probe), but TraceView with raw data looks fine (and has spikes), raw data in Kilosort GUI also looks fine.

In the table with all the clusters they also appear normal, as well as FeatureView, amplitude, correlogram, etc (screenshots attached). I have an impression it is a problem of displaying cluster Waveforms (and the problem persists when all traces are shown or if they are averaged).

I tried to delete state.json file both locally (in data folder) and in home folder, it did not help.

Thanks for help!
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