cortex-lab / cortex-lab/phy

Programmatically save cluster_info.tsv

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area: data type: enhancement
Dominant language
Python
Stars
430
Forks
187
Avg merge
2h 31m
Merged PRs (30d)
2

Description

Is there a command to export the cluster info of a sorted recording to a .tsv file without opening the GUI and pressing ctrl-S?

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by locating the code that handles the GUI Ctrl-S action and the generation of cluster_info.tsv. Determine whether that export path can be reached without opening the GUI, then define and implement a command or programmatic entry point whose output matches the existing export.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
cli, data
Issue type
Feature
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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