cortex-lab / cortex-lab/phy

Problem with OpenGL Drivers [Ubuntu 22.04]

Open
#1,196 2 comments 0 reactions 0 assignees View on GitHub

Nobody has claimed this yet.

area: installation type: bug
Dominant language
Python
Stars
430
Forks
187
Avg merge
2h 31m
Merged PRs (30d)
2

Description

Hi everyone,

I am trying to install Phy on Ubuntu 22.04.1 on an AMD/ATI Mobility Radeon HD 5430 graphics card. I haven't been able to launch the GUI due to the following errors:

$ phy template-gui params.py 
16:34:03.753 [W] model:655            Skipping spike waveforms that do not exist, they will be extracted on the fly from the raw data as needed.
Warning: Ignoring XDG_SESSION_TYPE=wayland on Gnome. Use QT_QPA_PLATFORM=wayland to run on Wayland anyway.
libGL error: MESA-LOADER: failed to open radeonsi: /usr/lib/dri/radeonsi_dri.so: cannot open shared object file: No such file or directory (search paths /usr/lib/x86_64-linux-gnu/dri:\$${ORIGIN}/dri:/usr/lib/dri, suffix _dri)
libGL error: failed to load driver: radeonsi
libGL error: MESA-LOADER: failed to open swrast: /usr/lib/dri/swrast_dri.so: cannot open shared object file: No such file or directory (search paths /usr/lib/x86_64-linux-gnu/dri:\$${ORIGIN}/dri:/usr/lib/dri, suffix _dri)
libGL error: failed to load driver: swrast
WebEngineContext used before QtWebEngine::initialize() or OpenGL context creation failed.
QGLXContext: Failed to create dummy contextglxinfo | grep "OpenGL version"
OpenGL version string: 4.6 (Compatibility Profile) Mesa 22.2.5
16:34:04.099 [W] gui:671              Could not create view TemplateFeatureView.
Failed to create OpenGL context for format QSurfaceFormat(version 2.0, options QFlags<QSurfaceFormat::FormatOption>(), depthBufferSize 24, redBufferSize -1, greenBufferSize -1, blueBufferSize -1, alphaBufferSize -1, stencilBufferSize 8, samples 0, swapBehavior QSurfaceFormat::DefaultSwapBehavior, swapInterval 1, colorSpace QSurfaceFormat::DefaultColorSpace, profile  QSurfaceFormat::NoProfile) 
Aborted (core dumped)`

So the main problem seems to be failure with creating an OpenGL context. I tried updating the drivers and the mesa-util package, and that got me to this error:

$ phy template-gui params.py 
18:02:20.322 [W] model:655            Skipping spike waveforms that do not exist, they will be extracted on the fly from the raw data as needed.
Warning: Ignoring XDG_SESSION_TYPE=wayland on Gnome. Use QT_QPA_PLATFORM=wayland to run on Wayland anyway.
libGL error: MESA-LOADER: failed to open radeonsi: /usr/lib/dri/radeonsi_dri.so: cannot open shared object file: No such file or directory (search paths /usr/lib/x86_64-linux-gnu/dri:\$${ORIGIN}/dri:/usr/lib/dri, suffix _dri)
libGL error: failed to load driver: radeonsi
libGL error: MESA-LOADER: failed to open swrast: /usr/lib/dri/swrast_dri.so: cannot open shared object file: No such file or directory (search paths /usr/lib/x86_64-linux-gnu/dri:\$${ORIGIN}/dri:/usr/lib/dri, suffix _dri)
libGL error: failed to load driver: swrast
Segmentation fault (core dumped)

I tried updating the drivers by updating the mesa-utils library (which seems to be an open-source OpenGL implementation for Linux). I also managed to locate the packages and tried setting a symbolic link and adding the path the libraries are in to the 'LD_LIBRARY_PATH', none of which worked.

I got a suggestion to force Phy to use software rendering instead of hardware acceleration:

export LIBGL_ALWAYS_SOFTWARE=1

This managed to get rid of one of the driver errors, but the other one is still a problem (and this also didn't fix the broader issue). So this is the current error I'm getting:

$ phy template-gui params.py 
19:06:50.685 [W] model:655            Skipping spike waveforms that do not exist, they will be extracted on the fly from the raw data as needed.
Warning: Ignoring XDG_SESSION_TYPE=wayland on Gnome. Use QT_QPA_PLATFORM=wayland to run on Wayland anyway.
libGL error: MESA-LOADER: failed to open swrast: /usr/lib/dri/swrast_dri.so: cannot open shared object file: No such file or directory (search paths /usr/lib/x86_64-linux-gnu/dri:\$${ORIGIN}/dri:/usr/lib/dri, suffix _dri)
libGL error: failed to load driver: swrast
Segmentation fault (core dumped)

If anyone has any suggestions on what I could try next, it would be greatly appreciated!

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reproducing phy template-gui params.py on Ubuntu 22.04 with the reported AMD/ATI Mobility Radeon HD 5430 setup, then inspect the Mesa and OpenGL environment described in the logs. No repository file or test is named; done would mean the GUI launches without the reported OpenGL context failure or segmentation fault.

Written by the indexing model from the issue text.

Assessment

Tech stack
linux, python, ubuntu
Domain
desktop, operating-systems
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.