cortex-lab / cortex-lab/phy

In WaveformView, channel locations incorrect

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area: data status: needs-info type: bug
Dominant language
Python
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Forks
187
Avg merge
2h 31m
Merged PRs (30d)
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Description

Hello ! First, thank you for your help!
In Phy's WaveformView, the location of the channels do not match the location I entered into Spikeinterface.
Here is the probe file I put into spikeinterface:
buzsaki64probe.csv

image

image

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with Phy's WaveformView and the attached buzsaki64probe.csv, comparing the channel positions shown in the view with those entered into SpikeInterface. Reproduce the mismatch using the supplied probe and determine where the locations diverge; done means the displayed channel locations match the probe input.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
data-visualization
Issue type
Bug
Difficulty
3/5
Estimated time
1-2 days
Activity status
Quiet
Clarity
Needs clarification
Newbie friendliness
45/100

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