AmplidueView scattered at 0 amplidude
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- Dominant language
- Python
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- 430
- Forks
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- Merged PRs (30d)
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Description
Hi,
I'm having an issue with clusters showing zero amplitude for all spikes in the "AmplitudeView" panel.
As you can see in the attached example, spikes seem perfectly normal with varying amplitudes, and the rest of the panels look fine.
About half of the clusters have that display issue. what could initiate this problem and how can I fix this? (I used kilosort 2.5)
Regards,
Hadar
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reproducing the report in the AmplitudeView panel with Kilosort 2.5 data, comparing clusters whose amplitudes display normally with the affected zero-amplitude clusters. The payload names no source file or test, so investigation must first locate the AmplitudeView data path and identify why only some clusters lose their values; done means affected clusters show their varying spike amplitudes.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data-visualization
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100