Questions about scales
Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 430
- Forks
- 187
- Avg merge
- 2h 31m
- Merged PRs (30d)
- 2
Description
Dear Cyrille,
Could you help me to figure out what scales are used by Phy in the following views:
- On the figure below you can see TraceView and TemplateView with spikes fitted with the template (in blue).
I thought that Y axis of TemplateView is channel number, but as can be seen at TraceView, traces in channel 13 are selected, whereas TemplateView shows the template somewhere around value "4". In addition, Y axis is fractional (e.g. 4.5) and has negative values. Therefore it is unlikely a channel number.
-
Are scales of Y axis of AmplitudeView in uV for "feature" and scaling factor for "template" views?
-
In CorrelogramView X axis is in ms, but is Y - average correlation coefficient or firing rate or else?
-
Is Y axis in FiringRateView a frequency of firing?
Thank you in advance for clarification.
Sincerely,
Stan
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by inspecting the TraceView, TemplateView, AmplitudeView, CorrelogramView, and FiringRateView entry points and their axis-label or scaling documentation. Determine what each axis represents and document the answers for all views; the issue is done when the scale meanings are clear to users.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data-visualization
- Issue type
- Documentation
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100