common-workflow-language / common-workflow-language/user_guide

intermediate lesson: workflow design choices and the 7 levels of configuration

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Dominant language
Common Workflow Language
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Description

In order of visibility to users:
1. Workflow level inputs (without defaults) these are mandatory
2. Workflow level inputs (**with** defaults) these are optional
3. Tool inputs set at the Workflow step level
4. Tool level inputs (without defaults)
5. Tool level inputs (**with** defaults)
6. Tool level fixed command line arguments
7. Modifying the tool itself

Contributor guide

Open the contributing guide

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