common-workflow-language / common-workflow-language/cwltool
Detect when Singularity isn't properly configured to mount local folders
Open
- Dominant language
- Python
- Stars
- 376
- Forks
- 255
- Avg merge
- 2d 7h
- Merged PRs (30d)
- 12
Description
I am trying to define a `CommandLineTool` which is either available via a docker container (pulled from our private repository) or directly from a Singularity image file on the local machine or from an SFTP server but could not find out how to do it.
In the docs I found a hint that Singularity is supported but could not find a field to describe it.
What I want to do is running the tool inside a Docker container OR using a Singularity image with a given path.
Can anyone point me into the right direction?
Contributor guide
Assessment
This issue has not been assessed yet.