cfe-lab / cfe-lab/MiCall

QAI downloads for gene regions

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enhancement
Dominant language
Python
Stars
21
Forks
11
Avg merge
12h 5m
Merged PRs (30d)
24

Description

Currently, the consensus downloads are all for the complete seed regions. Add trimmed versions for PR, RT, INT, and V3LOOP.

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Locate the code or data definitions that generate consensus downloads for complete seed regions, then trace how region boundaries are represented. Add trimmed downloads for PR, RT, INT, and V3LOOP, and verify that each requested region produces the expected download alongside the existing complete-seed versions.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
data
Issue type
Feature
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
45/100

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