Add configuration for minimum preliminary mapping
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Python
- Stars
- 21
- Forks
- 11
- Avg merge
- 12h 5m
- Merged PRs (30d)
- 24
Description
This follows issue #305, to add a min_prelim_reads field to the seed configuration with a default of 10. Configure V3LOOP to have a minimum of 1.
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by locating the seed configuration and the V3LOOP configuration entry in the Python project. Check how existing configuration defaults are represented, then verify that the new field defaults to 10 and that V3LOOP uses 1. No test file or entry point is mentioned in the issue, so identify the relevant configuration tests or validation path before making the change.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 2/5
- Estimated time
- 1-3 hours
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 45/100