cfe-lab / cfe-lab/MiCall

Review Quality Control Cut Offs

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enhancement
Dominant language
Python
Stars
21
Forks
11
Avg merge
12h 5m
Merged PRs (30d)
24

Description

When Conan's code generates reports, it includes a Quality Control (QC) report that rejects samples if some measurements are below the cut offs. We need to review those cut-off values.
Conan will collect QC data from some runs and display it in a way that will help Richard review the cut-off values.

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

No file, test, or entry point is named. Start by locating Conan's QC report generation and the measurements used for the cut-offs; clarify which runs and QC data should be collected, how they should be displayed for review, and what result marks the issue complete.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
bioinformatics
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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