cfe-lab / cfe-lab/MiCall

Display selected sample name

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enhancement micall
Dominant language
Python
Stars
21
Forks
11
Avg merge
12h 5m
Merged PRs (30d)
24

Description

Removing the sample names for issue #162 meant that the sample name is no longer in the coverage map's label.

It would probably look better anyway to display the sample name and region in the HTML instead of in the image.

  • Display sample name and region above coverage map.
  • Remove region name from coverage map.

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by locating the code that generates the coverage map image and its surrounding HTML, then trace how the sample name and region are currently supplied. Done means the HTML displays both above the coverage map and the region name is no longer drawn inside the image; verify the rendered map output and any related tests.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
bioinformatics
Issue type
Feature
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
45/100

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