cancervariants / cancervariants/therapy-normalization

Only fetch metadata for records used in constructing normalized concept

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#217 0 comments 0 reactions 0 assignees View on GitHub
bug ux
Dominant language
Python
Stars
15
Forks
3
PR merge metrics
No merged PRs in 30d

Description

Eg, many Drugs@FDA records include xrefs to RxNorm entities that we don't load. Should the normalize/ result for that record include RxNorm meta (probably not)?

Contributor guide

No contributing guide indexed for this repository

Research direction

No files, tests, or entry points are named. Start by tracing how normalization results fetch and attach metadata for Drugs@FDA records, then compare that behavior with unloaded RxNorm entities referenced by xrefs. Done means the expected inclusion or exclusion of RxNorm metadata is decided and covered by an appropriate regression test.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
backend, bioinformatics
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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