cancerDHC / cancerDHC/csv2caDSR
Add support to export to Portable Format for Biomedical Data (PFB)
Open
- Dominant language
- Scala
- Stars
- 0
- Forks
- 1
- PR merge metrics
- No merged PRs in 30d
Description
We'll probably need to use [avro4s](https://github.com/sksamuel/avro4s), and then test it using [pypfb](https://github.com/uc-cdis/pypfb).
Contributor guide
No contributing guide indexed for this repository
Research direction
Start by locating the existing CSV-to-caDSR export path and determine where a PFB export would fit. Evaluate avro4s for producing the format, then use pypfb to check whether the generated output is valid; done means the project can export PFB data that pypfb accepts.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- scala
- Domain
- data
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100