calculate effective family size for MSA_ripe rule
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finishing touches
version 3
- Dominant language
- Python
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Description
the script should live in: `scripts/calculate_Neff.py`
Once HHblits is completed we need to calculate the effective family size from `a3m` file.
N_eff = N_clu(%) / sqrt(N_aa)
depending on N_eff and length of the protein the script should make a decision if the MSA is "ripe" for Rosetta predictions, or "not_ripe".
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