biocore / biocore/gemelli

Gemelli for spatial data

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Dominant language
Python
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Forks
20
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Description

Hi,

Sorry if this is a naive question but i'm not familiar with the methods used in gemelli and having a bit of trouble understanding how exactly the method works.

I have some microbiome data measured across space, but only along one axis i.e. the sampling points vary along the longitudinal axis but not laterally. Thus this dataset is essentially 1D in that sense.

In this case, would roughly following the CTF tutorial be appropriate for my dataset and allow me to see changes between conditions across space rather than time?

thanks,

Adam

Contributor guide

No contributing guide indexed for this repository

Research direction

Start with the CTF tutorial and the project's method documentation to determine whether their assumptions cover one-dimensional spatial sampling. Done means the documentation clearly explains whether CTF can compare conditions along one spatial axis, or directs users to an appropriate method.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
data
Issue type
Documentation
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

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