biocore / biocore/gemelli

Error with Install of Gemelli standalone

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Dominant language
Python
Stars
92
Forks
20
PR merge metrics
No merged PRs in 30d

Description

Greetings, I am having some issues trying to install gemelli as a standalone outside of qiime2. The output states that there is no module named 'numpy' but I have installed. I can see it in my pip list too. Is there anything I can do differently to install this library?

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First steps

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Research direction

Start by reproducing the standalone Gemelli installation and comparing the reported missing numpy module with the environment shown by pip list. Trace the standalone installation requirements and determine whether the installation instructions or dependency setup needs correction; done means the package installs and imports successfully outside QIIME 2.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
tooling
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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