biocore / biocore/empress

Using 0-indexing for the tree indices

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#223 0 comments 0 reactions 0 assignees View on GitHub
refactoring
Dominant language
JavaScript
Stars
56
Forks
32
PR merge metrics
No merged PRs in 30d

Description

Suggestion from @dhakim87 during code review today. Indices are currently 1-indexed to resemble the original BP paper.

Contributor guide

Open the contributing guide

Research direction

The issue does not name files, tests, or entry points. Trace how tree indices are assigned and consumed in the JavaScript visualization, then identify every affected display or lookup; done means the tree uses 0-based indices consistently and existing behavior remains covered by tests.

Written by the indexing model from the issue text.

Assessment

Tech stack
javascript
Domain
data-visualization
Issue type
Feature
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
42/100

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