bio-learn / bio-learn/biolearn
Sample code for caching for faster DNAm loading
Open
- Dominant language
- Python
- Stars
- 91
- Forks
- 39
- PR merge metrics
- No merged PRs in 30d
Description
@sarudak I wasn't able to find a sample code to load data with caching parameters so I am adding this here:
```
cache_path='data/cache/'
cache=biolearn.cache.LocalFolderCache(cache_path,1000)
data_source = DataLibrary(cache=cache).get(geo)
```
Contributor guide
No contributing guide indexed for this repository
Research direction
Start by locating the documentation or examples for DNAm data loading, then review the DataLibrary and LocalFolderCache usage shown in the issue. Done means the caching sample is added in an appropriate place and clearly demonstrates loading data with cache parameters.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- documentation
- Issue type
- Documentation
- Difficulty
- 1/5
- Estimated time
- Under an hour
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 52/100