Caclulate iBAQ from standalone DIA-NN run
- Dominant language
- HTML
- Stars
- 16
- Forks
- 14
- PR merge metrics
- No merged PRs in 30d
Description
Hi,
is it possible to use this package to calculate iBAQ values from the output of standalone DIA-NN 2.0+ ?
I guess I should first parse the DIA-NN output with "quantmsio_cli convert-diann" and then feed it to ibaqpy but the steps and inputs needed are a bit confusing.
Thank you for your effort and help.
Contributor guide
No contributing guide indexed for this repository
Research direction
Start by tracing the standalone DIA-NN 2.0+ output through the mentioned quantmsio_cli convert-diann command and then into ibaqpy, checking the package's existing input expectations. Document the required inputs and complete command sequence; done means a newcomer can reproduce iBAQ calculation from a standalone DIA-NN run.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Documentation
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100