aws / aws/amazon-sagemaker-examples

Open svs file in s3

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#1,059 3 comments 0 reactions 0 assignees View on GitHub
Dominant language
Jupyter Notebook
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Description

Hello,
I'm trying to open an svs file in s3 using sagemaker notebook and it doesn't work, my code is like

import openslide

bucket=''
data_key = 'abc.svs'
data_location = 's3://{}/{}'.format(bucket, data_key)
openslide.OpenSlide(data_location)

and I received the answer:
OpenSlideUnsupportedFormatError: Unsupported or missing image file

Contributor guide

Open the contributing guide

Research direction

Start from the SageMaker notebook environment and the shown openslide.OpenSlide(data_location) call. Check the repository for a notebook or entry point demonstrating SVS files or S3 access, then determine what outcome is expected for this example. Done means identifying a supported approach or documenting that the reported direct S3 URI is unsupported.

Written by the indexing model from the issue text.

Assessment

Tech stack
aws, jupyter-notebook, python
Domain
cloud, machine-learning
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
20/100

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