[command-hooks] allow adding command options to custom runtime commands

### Is this feature request related to a new or existing Amplify category?

New category

### Describe the feature you'd like to request

I'd like to using `node -r tsconfig-paths/register -r esbuild-register` to config a TypeScript rumtime.
but currently the config doesn't support passing command options to the runtime command.

### Describe the solution you'd like

```json
{
"extensions": {
"ts": {
"runtime": "node",
"options": ["-r", "tsconfig-paths/register", "-r", "esbuild-register"]
}
}
}
```

### Additional context

_No response_

### Is this something that you'd be interested in working on?

- [X] 👋 I may be able to implement this feature request

### Would this feature include a breaking change?

- [X] ⚠️ This feature might incur a breaking change

Start by locating the command-hooks configuration and the code that builds or invokes custom runtime commands. Trace how the runtime command is assembled, then verify that an options array produces the requested node -r arguments and that existing runtime behavior remains unchanged.

Written by the indexing model from the issue text.