After a window with focus is minimized, yabai still reports that the window has focus.

You can easily reproduce this issue using the following script

```zsh
# Get the current window's ID and has-focus attribute
window_info=$(yabai -m query --windows --window)
window_id=$(echo "$window_info" | jq '.id')
window_focus=$(echo "$window_info" | jq '."has-focus"')

# Print the window's ID and has-focus attribute
echo "Window ID: $window_id"
echo "Has Focus: $window_focus"

# Minimize the window using the yabai command
yabai -m window "$window_id" --minimize

# Wait for 1.5 seconds
sleep 1.5

# Query the window's has-focus attribute
window_focus_after=$(yabai -m query --windows --window "$window_id" | jq '."has-focus"')

# Print the window's has-focus attribute after minimizing
echo "Has Focus After Minimize: $window_focus_after"
```

```
❯ nix-shell -p jq

[nix-shell:~]$ # Get the current window's ID and has-focus attribute
window_info=$(yabai -m query --windows --window)
window_id=$(echo "$window_info" | jq '.id')
window_focus=$(echo "$window_info" | jq '."has-focus"')

# Print the window's ID and has-focus attribute
echo "Window ID: $window_id"
echo "Has Focus: $window_focus"

# Minimize the window using the yabai command
yabai -m window "$window_id" --minimize

# Wait for 1.5 seconds
sleep 1.5

# Query the window's has-focus attribute
window_focus_after=$(yabai -m query --windows --window "$window_id" | jq '."has-focus"')

# Print the window's has-focus attribute after minimizing
echo "Has Focus After Minimize: $window_focus_after"
Window ID: 979
Has Focus: true
Has Focus After Minimize: true

[nix-shell:~]$
```

Run the provided zsh reproduction on macOS and compare the focus value before and after `yabai -m window --minimize`. Trace the `query --windows --window` and `window --minimize` entry points to determine why the minimized window remains reported as focused. Done means the follow-up query reports `has-focus: false` after minimization.

Written by the indexing model from the issue text.