aryarm / aryarm/as_analysis

allow for linking samples from a terra bucket

Open
#57 2 comments 0 reactions 0 assignees View on GitHub
enhancement gcp
Dominant language
R
Stars
10
Forks
9
PR merge metrics
No merged PRs in 30d

Description

instead of requiring that the user copy the gtex data to their own bucket, we could just get it for them automatically

Contributor guide

No contributing guide indexed for this repository

Research direction

Start by locating the pipeline step that currently requires users to copy GTEx data into their own bucket and review how samples are configured. Done means the pipeline can retrieve the GTEx data from the Terra bucket automatically without requiring that manual copy.

Written by the indexing model from the issue text.

Assessment

Domain
cloud, data-engineering
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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