Class missing registration in KRYO
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- Java
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Description
Using Spark 0.14.1 if I set [hoodie.write.status.storage.level|https://hudi.apache.org/docs/configurations/#hoodiewritestatusstoragelevel] to e.g. DISK_ONLY_3 (important is replication factor).
Then I will see exceptions in logs like this
{code:java}
Caused by: java.lang.RuntimeException: org.apache.spark.SparkException: Failed to register classes with Kryo
at org.apache.spark.serializer.KryoSerializer.$anonfun$newKryo$5(KryoSerializer.scala:187)
at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23)
at org.apache.spark.util.Utils$.withContextClassLoader(Utils.scala:179)
at org.apache.spark.serializer.KryoSerializer.newKryo(KryoSerializer.scala:175)
at org.apache.spark.serializer.KryoSerializer$$anon$1.create(KryoSerializer.scala:106)
at com.esotericsoftware.kryo.pool.KryoPoolQueueImpl.borrow(KryoPoolQueueImpl.java:48)
at org.apache.spark.serializer.KryoSerializer$PoolWrapper.borrow(KryoSerializer.scala:113)
at org.apache.spark.serializer.KryoSerializerInstance.borrowKryo(KryoSerializer.scala:402)
at org.apache.spark.serializer.KryoSerializerInstance.deserialize(KryoSerializer.scala:455)
at org.apache.spark.network.netty.NettyBlockRpcServer.deserializeMetadata(NettyBlockRpcServer.scala:185)
at org.apache.spark.network.netty.NettyBlockRpcServer.receive(NettyBlockRpcServer.scala:120)
at org.apache.spark.network.server.AbstractAuthRpcHandler.receive(AbstractAuthRpcHandler.java:57)
at org.apache.spark.network.server.TransportRequestHandler.processRpcRequest(TransportRequestHandler.java:163)
at org.apache.spark.network.server.TransportRequestHandler.handle(TransportRequestHandler.java:109)
at org.apache.spark.network.server.TransportChannelHandler.channelRead0(TransportChannelHandler.java:140)
at org.apache.spark.network.server.TransportChannelHandler.channelRead0(TransportChannelHandler.java:53)
at io.netty.channel.SimpleChannelInboundHandler.channelRead(SimpleChannelInboundHandler.java:99)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.handler.timeout.IdleStateHandler.channelRead(IdleStateHandler.java:286)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:442)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:103)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at org.apache.spark.network.util.TransportFrameDecoder.channelRead(TransportFrameDecoder.java:102)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.channel.DefaultChannelPipeline$HeadContext.channelRead(DefaultChannelPipeline.java:1410)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:440)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:919)
at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:166)
at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:788)
at io.netty.channel.nio.NioEventLoop.processSelectedKeysOptimized(NioEventLoop.java:724)
at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:650)
at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:562)
at io.netty.util.concurrent.SingleThreadEventExecutor$4.run(SingleThreadEventExecutor.java:997)
at io.netty.util.internal.ThreadExecutorMap$2.run(ThreadExecutorMap.java:74)
at io.netty.util.concurrent.FastThreadLocalRunnable.run(FastThreadLocalRunnable.java:30)
at java.base/java.lang.Thread.run(Thread.java:840)
Caused by: java.lang.ClassNotFoundException: org.apache.spark.HoodieSparkKryoRegistrar
at java.base/java.net.URLClassLoader.findClass(URLClassLoader.java:445)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:592)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:525)
at java.base/java.lang.Class.forName0(Native Method)
at java.base/java.lang.Class.forName(Class.java:467)
at org.apache.spark.util.SparkClassUtils.classForName(SparkClassUtils.scala:43)
at org.apache.spark.util.SparkClassUtils.classForName$(SparkClassUtils.scala:36)
at org.apache.spark.util.Utils$.classForName(Utils.scala:95)
at org.apache.spark.serializer.KryoSerializer.$anonfun$newKryo$7(KryoSerializer.scala:182)
at scala.collection.TraversableLike.$anonfun$map$1(TraversableLike.scala:286)
at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
at scala.collection.TraversableLike.map(TraversableLike.scala:286)
at scala.collection.TraversableLike.map$(TraversableLike.scala:279)
at scala.collection.AbstractTraversable.map(Traversable.scala:108)
at org.apache.spark.serializer.KryoSerializer.$anonfun$newKryo$5(KryoSerializer.scala:182)
... 44 more
at org.apache.spark.network.client.TransportResponseHandler.handle(TransportResponseHandler.java:209)
at org.apache.spark.network.server.TransportChannelHandler.channelRead0(TransportChannelHandler.java:142)
at org.apache.spark.network.server.TransportChannelHandler.channelRead0(TransportChannelHandler.java:53)
at io.netty.channel.SimpleChannelInboundHandler.channelRead(SimpleChannelInboundHandler.java:99)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.handler.timeout.IdleStateHandler.channelRead(IdleStateHandler.java:286)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:442)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:103)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at org.apache.spark.network.util.TransportFrameDecoder.channelRead(TransportFrameDecoder.java:102)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.channel.DefaultChannelPipeline$HeadContext.channelRead(DefaultChannelPipeline.java:1410)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:440)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:919)
at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:166)
at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:788)
at io.netty.channel.nio.NioEventLoop.processSelectedKeysOptimized(NioEventLoop.java:724)
at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:650)
at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:562)
at io.netty.util.concurrent.SingleThreadEventExecutor$4.run(SingleThreadEventExecutor.java:997)
at io.netty.util.internal.ThreadExecutorMap$2.run(ThreadExecutorMap.java:74)
at io.netty.util.concurrent.FastThreadLocalRunnable.run(FastThreadLocalRunnable.java:30)
... 1 more{code}
And following messages
Block rdd_15466_4464 replicated to only 0 peer(s) instead of 2 peers
Failed to replicate rdd_15466_4464 to BlockManagerId(269, 10.9.53.43, 38081, None), failure #1
Error while uploading rdd_15466_4464
many times - basically even message
Failed to replicate rdd_15466_4464 to BlockManagerId(269, 10.9.53.43, 38081, None), failure #1
shown 2 times, basically meaning that 1 copy was retained at original location, but 2 others were failed to proceed
## JIRA info
- Link: https://issues.apache.org/jira/browse/HUDI-7868
- Type: Bug
Contributor guide
No contributing guide indexed for this repository
Research direction
Reproduce the failure with Spark 0.14.1 and the DISK_ONLY_3 hoodie.write.status.storage.level setting, then trace the HoodieSparkKryoRegistrar class named in the exception and Spark's Kryo registration path. Done means the class is available to Kryo and replicated RDD blocks no longer produce registration or peer-replication failures.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- java
- Domain
- data-engineering, distributed-systems
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Active
- Clarity
- Needs clarification
- Newbie friendliness
- 45/100