apache / apache/hudi

Class missing registration in KRYO

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from-jira priority:high type:bug
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Java
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Description

Using Spark 0.14.1 if I set [hoodie.write.status.storage.level|https://hudi.apache.org/docs/configurations/#hoodiewritestatusstoragelevel] to e.g. DISK_ONLY_3 (important is replication factor).
Then I will see exceptions in logs like this 
{code:java}
Caused by: java.lang.RuntimeException: org.apache.spark.SparkException: Failed to register classes with Kryo
at org.apache.spark.serializer.KryoSerializer.$anonfun$newKryo$5(KryoSerializer.scala:187)
at scala.runtime.java8.JFunction0$mcV$sp.apply(JFunction0$mcV$sp.java:23)
at org.apache.spark.util.Utils$.withContextClassLoader(Utils.scala:179)
at org.apache.spark.serializer.KryoSerializer.newKryo(KryoSerializer.scala:175)
at org.apache.spark.serializer.KryoSerializer$$anon$1.create(KryoSerializer.scala:106)
at com.esotericsoftware.kryo.pool.KryoPoolQueueImpl.borrow(KryoPoolQueueImpl.java:48)
at org.apache.spark.serializer.KryoSerializer$PoolWrapper.borrow(KryoSerializer.scala:113)
at org.apache.spark.serializer.KryoSerializerInstance.borrowKryo(KryoSerializer.scala:402)
at org.apache.spark.serializer.KryoSerializerInstance.deserialize(KryoSerializer.scala:455)
at org.apache.spark.network.netty.NettyBlockRpcServer.deserializeMetadata(NettyBlockRpcServer.scala:185)
at org.apache.spark.network.netty.NettyBlockRpcServer.receive(NettyBlockRpcServer.scala:120)
at org.apache.spark.network.server.AbstractAuthRpcHandler.receive(AbstractAuthRpcHandler.java:57)
at org.apache.spark.network.server.TransportRequestHandler.processRpcRequest(TransportRequestHandler.java:163)
at org.apache.spark.network.server.TransportRequestHandler.handle(TransportRequestHandler.java:109)
at org.apache.spark.network.server.TransportChannelHandler.channelRead0(TransportChannelHandler.java:140)
at org.apache.spark.network.server.TransportChannelHandler.channelRead0(TransportChannelHandler.java:53)
at io.netty.channel.SimpleChannelInboundHandler.channelRead(SimpleChannelInboundHandler.java:99)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.handler.timeout.IdleStateHandler.channelRead(IdleStateHandler.java:286)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:442)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:103)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at org.apache.spark.network.util.TransportFrameDecoder.channelRead(TransportFrameDecoder.java:102)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.channel.DefaultChannelPipeline$HeadContext.channelRead(DefaultChannelPipeline.java:1410)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:440)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:919)
at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:166)
at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:788)
at io.netty.channel.nio.NioEventLoop.processSelectedKeysOptimized(NioEventLoop.java:724)
at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:650)
at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:562)
at io.netty.util.concurrent.SingleThreadEventExecutor$4.run(SingleThreadEventExecutor.java:997)
at io.netty.util.internal.ThreadExecutorMap$2.run(ThreadExecutorMap.java:74)
at io.netty.util.concurrent.FastThreadLocalRunnable.run(FastThreadLocalRunnable.java:30)
at java.base/java.lang.Thread.run(Thread.java:840)
Caused by: java.lang.ClassNotFoundException: org.apache.spark.HoodieSparkKryoRegistrar
at java.base/java.net.URLClassLoader.findClass(URLClassLoader.java:445)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:592)
at java.base/java.lang.ClassLoader.loadClass(ClassLoader.java:525)
at java.base/java.lang.Class.forName0(Native Method)
at java.base/java.lang.Class.forName(Class.java:467)
at org.apache.spark.util.SparkClassUtils.classForName(SparkClassUtils.scala:43)
at org.apache.spark.util.SparkClassUtils.classForName$(SparkClassUtils.scala:36)
at org.apache.spark.util.Utils$.classForName(Utils.scala:95)
at org.apache.spark.serializer.KryoSerializer.$anonfun$newKryo$7(KryoSerializer.scala:182)
at scala.collection.TraversableLike.$anonfun$map$1(TraversableLike.scala:286)
at scala.collection.mutable.ResizableArray.foreach(ResizableArray.scala:62)
at scala.collection.mutable.ResizableArray.foreach$(ResizableArray.scala:55)
at scala.collection.mutable.ArrayBuffer.foreach(ArrayBuffer.scala:49)
at scala.collection.TraversableLike.map(TraversableLike.scala:286)
at scala.collection.TraversableLike.map$(TraversableLike.scala:279)
at scala.collection.AbstractTraversable.map(Traversable.scala:108)
at org.apache.spark.serializer.KryoSerializer.$anonfun$newKryo$5(KryoSerializer.scala:182)
... 44 more

at org.apache.spark.network.client.TransportResponseHandler.handle(TransportResponseHandler.java:209)
at org.apache.spark.network.server.TransportChannelHandler.channelRead0(TransportChannelHandler.java:142)
at org.apache.spark.network.server.TransportChannelHandler.channelRead0(TransportChannelHandler.java:53)
at io.netty.channel.SimpleChannelInboundHandler.channelRead(SimpleChannelInboundHandler.java:99)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.handler.timeout.IdleStateHandler.channelRead(IdleStateHandler.java:286)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:442)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.handler.codec.MessageToMessageDecoder.channelRead(MessageToMessageDecoder.java:103)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at org.apache.spark.network.util.TransportFrameDecoder.channelRead(TransportFrameDecoder.java:102)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:444)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.AbstractChannelHandlerContext.fireChannelRead(AbstractChannelHandlerContext.java:412)
at io.netty.channel.DefaultChannelPipeline$HeadContext.channelRead(DefaultChannelPipeline.java:1410)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:440)
at io.netty.channel.AbstractChannelHandlerContext.invokeChannelRead(AbstractChannelHandlerContext.java:420)
at io.netty.channel.DefaultChannelPipeline.fireChannelRead(DefaultChannelPipeline.java:919)
at io.netty.channel.nio.AbstractNioByteChannel$NioByteUnsafe.read(AbstractNioByteChannel.java:166)
at io.netty.channel.nio.NioEventLoop.processSelectedKey(NioEventLoop.java:788)
at io.netty.channel.nio.NioEventLoop.processSelectedKeysOptimized(NioEventLoop.java:724)
at io.netty.channel.nio.NioEventLoop.processSelectedKeys(NioEventLoop.java:650)
at io.netty.channel.nio.NioEventLoop.run(NioEventLoop.java:562)
at io.netty.util.concurrent.SingleThreadEventExecutor$4.run(SingleThreadEventExecutor.java:997)
at io.netty.util.internal.ThreadExecutorMap$2.run(ThreadExecutorMap.java:74)
at io.netty.util.concurrent.FastThreadLocalRunnable.run(FastThreadLocalRunnable.java:30)
... 1 more{code}
And following messages
Block rdd_15466_4464 replicated to only 0 peer(s) instead of 2 peers
Failed to replicate rdd_15466_4464 to BlockManagerId(269, 10.9.53.43, 38081, None), failure #1
Error while uploading rdd_15466_4464
many times - basically even message 
Failed to replicate rdd_15466_4464 to BlockManagerId(269, 10.9.53.43, 38081, None), failure #1
shown 2 times, basically meaning that 1 copy was retained at original location, but 2 others were failed to proceed

 

## JIRA info

- Link: https://issues.apache.org/jira/browse/HUDI-7868
- Type: Bug

Contributor guide

No contributing guide indexed for this repository

Research direction

Reproduce the failure with Spark 0.14.1 and the DISK_ONLY_3 hoodie.write.status.storage.level setting, then trace the HoodieSparkKryoRegistrar class named in the exception and Spark's Kryo registration path. Done means the class is available to Kryo and replicated RDD blocks no longer produce registration or peer-replication failures.

Written by the indexing model from the issue text.

Assessment

Tech stack
java
Domain
data-engineering, distributed-systems
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Active
Clarity
Needs clarification
Newbie friendliness
45/100

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