Incomplete JobService API Semantics

The JobService API (beam_job_api.proto) allows for the possibility of never seeing messages or states with Get(State|Message)Stream. This is because the  Get(State|Message)Stream calls need to have the job id which can only be obtained from the RunJobResponse. But in order to see all messages/states the streams need to be opened before the job starts.

This is fine in Dataflow as the preparation_id \== job_id, but this is not true in Flink.

Fix is to modify the API to only keep a single id to be used between the preparation/run APIs. 

Consumers of the API will have to be modified to meet the new semantics.

Dev list thread (https://lists.apache.org/thread.html/3ace7585278c0545185fa4bb8d6975283d5c48c097e1bb2c2e18b9a2@%3Cdev.beam.apache.org%3E)

Imported from Jira [BEAM-6442](https://issues.apache.org/jira/browse/BEAM-6442). Original Jira may contain additional context.
Reported by: rohdesam.