VHP4Safety / VHP4Safety/cloud

[METHOD AUDIT]: Missing fields in [METHOD]: RNA-sequencing (#143)

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method-audit
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Description

The method JSON generated from #143 is missing the following fields:

  • Assay name
  • Data producer
  • Available SOP or protocol
  • Ontology term
  • Type (ontology IRI)
  • Relevant AOP Wiki Key Event(s)
  • Relevant AOP Wiki Adverse Outcome Pathway(s)
  • Catalog number
  • Catalog webpage
  • Citation
  • VHP4Safety workflow stage
  • Workflow substage

Please update the original issue or the JSON file directly.

/cc @jmillanacosta @KHLIANG2

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the original issue #143 and the generated method JSON referenced here. Check each listed field against the method entry and populate the missing metadata in the original issue or JSON file; it is done when all 12 fields are present.

Written by the indexing model from the issue text.

Assessment

Domain
content
Issue type
Documentation
Difficulty
2/5
Estimated time
1-3 hours
Activity status
Quiet
Clarity
Mostly clear
Newbie friendliness
55/100

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