VEuPathDB / VEuPathDB/dnaseq-nextflow
why use "collectFile" for bw/bam and varscan cons files?
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- Dominant language
- Julia
- Stars
- 1
- Forks
- 1
- PR merge metrics
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Description
won't we get one file if we use "collectFile"?
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by locating the workflow process that uses collectFile for bw/bam and VarScan cons outputs. Check how collectFile groups files and compare the expected number of outputs with the workflow's downstream inputs; done means the aggregation behavior is confirmed and the issue is resolved or clearly documented.
Written by the indexing model from the issue text.
Assessment
- Domain
- bioinformatics
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100