SpikeInterface / SpikeInterface/spikeinterface
Kilosort runtime error when skip_kilosort_preprocessing=True
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- Dominant language
- Python
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Description
I'm getting the following error when running Kilosort2 with the following params: skip_kilosort_preprocessing=True and car=False:
"[\b> In trackAndSort (line 6)",
"In runTemplates (line 45)",
"In learnAndSolve8b (line 24)",
"In kilosort2_master (line 78)]\b",
"[\bWarning: An unexpected error occurred during CUDA execution. The CUDA error",
"was:",
"CUDA_ERROR_ILLEGAL_ADDRESS]\b",
I'm using cuda=9.1, cudnn=9.1-7.0.5,gcc=5.3.0, matlab=2018b, and spike interface=0.102.3
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Research direction
The report names Kilosort2, SpikeInterface 0.102.3, and the parameters skip_kilosort_preprocessing=True and car=False, but no repository file or test. Start by reproducing that configuration with the listed CUDA, cuDNN, GCC, and MATLAB versions, then trace the CUDA_ERROR_ILLEGAL_ADDRESS through the reported Kilosort call stack. Done means the configuration no longer fails or the incompatibility is clearly documented.
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Assessment
- Tech stack
- matlab, python
- Domain
- data
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100