Add references to software for post-spike-sorting Neuropixels data analysis
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Assessment
- Difficulty
- 1/5
- Estimated time
- Under an hour
- Newbie friendliness
- 52/100
- Issue type
- Documentation
- Clarity
- Clearly specified
- Activity status
- Stale
- Tech stack
- python
- Domain
- documentation
Research direction
Read the documentation's 'Analysing Neuropixels datasets' section and identify where its references are listed. Add the specified quality-control, loading, analysis, plotting, and general Neuropixels resource links; the section is done when all requested references are included and correctly formatted.
Written by the indexing model from the issue text.
Description
Hey there,
Following our email chat, here is a list of useful Neuropixels data analysis software that could be referenced at the end of the 'Analysing Neuropixels datasets' section of spikeinterface's documentation:
- Quality control
- Manual curation GUI: Phy, docs. Example workflow here.
- Bombcell: automated quality control, wiki
- IBL quality metrics
- Loading, analyzing and plotting data
You could also add a reference to this more general 'curated list of Neuropixels resources' from Julie: https://github.com/Julie-Fabre/awesome_neuropixels
Cheers!
- Dominant language
- Python
- Stars
- 847
- Forks
- 280
- Avg merge
- 3d 9h
- Merged PRs (30d)
- 29
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