SACGF / SACGF/variantgrid

GeneVersion handle multiple loci

Open
#520 1 comment 0 reactions 0 assignees View on GitHub
Dominant language
Python
Stars
30
Forks
3
Avg merge
9h 22m
Merged PRs (30d)
40

Description

We define gene version coordinates as the greatest extent of all linked transcript versions. If these are on different chromosomes we currently throw an error and don't deal with it.

This affects

* Coordinate doesn't show up on gene version page (GeneID:6473)
* KaryomappingGene.get_genomic_interval_and_strand - might need to return multiple results here or maybe just X over Y

Contributor guide

No contributing guide indexed for this repository

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.