SACGF / SACGF/variantgrid

Population data annotation - Genome Asia, Medical Genome Reference Bank, Iranome

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Annotation
Dominant language
Python
Stars
30
Forks
3
Avg merge
9h 22m
Merged PRs (30d)
40

Description

Are we able to access the ‘Medical Genome Reference Bank’ from David Thomas:
- 4000 genomes
- age over 70
- no cardiovascular defects, cancer or dementia

https://www.nature.com/articles/s41431-018-0279-z

Would be good for GA and AFHCS!!

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Also:

Genome Asia: https://browser.genomeasia100k.org/#tid=download
Iran - http://www.iranome.ir/

Contributor guide

No contributing guide indexed for this repository

Research direction

No files, tests, or entry points are named. Start by clarifying whether the Medical Genome Reference Bank, Genome Asia, and Iranome data are accessible and what “population data annotation” should produce for GA and AFHCS. Done would require an agreed source, access method, and concrete integration target.

Written by the indexing model from the issue text.

Assessment

Domain
data
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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