RosettaCommons / RosettaCommons/atomworks
Can't run examples from PyPI version of atomworks
Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 446
- Forks
- 52
- PR merge metrics
- No merged PRs in 30d
Description
As of 9/19 the version of atomworks you can obtain using pip or uv does results in an ImportError when trying to run from atomworks.io.utils.testing import get_pdb_path_or_buffer. Cloning the repo from GitHub does not result in this error.
Is the GitHub actions workflow that is supposed to update the PyPI version functioning correctly?
Contributor guide
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Reproduce the ImportError using the PyPI version installed with pip or uv, then compare it with a cloned checkout. Inspect the GitHub Actions workflow responsible for publishing atomworks and verify that the published package includes atomworks.io.utils.testing; done means the documented import works from the PyPI release.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- github-actions, python
- Domain
- build-system, release
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 38/100