RosettaCommons / RosettaCommons/RFdiffusion
Cyclic peptide structure prediction
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- Dominant language
- Python
- Stars
- 3.1k
- Forks
- 644
- PR merge metrics
- No merged PRs in 30d
Description
Hi! I wonder where to find the local version of Afcycdesign for large scale cyclic peptide structure prediction metioned in RFpeptides as I only found the colab version at https://colab.research.google.com/github/sokrypton/ColabDesign/blob/gamma/af/examples/predict.ipynb ? Thanks for any reply!
Contributor guide
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing the linked Colab entry point, af/examples/predict.ipynb, and the issue's reference to RFpeptides. The work would be complete when the local Afcycdesign entry point for large-scale cyclic peptide prediction is identified, or the documentation clearly states that only the Colab version is available.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics, machine-learning
- Issue type
- Documentation
- Difficulty
- 1/5
- Estimated time
- Under an hour
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100