RosettaCommons / RosettaCommons/RFdiffusion
How to run RFpeptides on the Google Colab?
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- Dominant language
- Python
- Stars
- 3.1k
- Forks
- 644
- PR merge metrics
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Description
Hello.
I'm a Japanese student and trying to run RFpeptides on the Google Colab by Mr. Sergey Ovchinnikov.
However, because of my poor knowledge about python program, I don't understand which columns and how I should change to add inference.cyclic and inference.cyc_chains flags for designing macrocyclic peptides.
I am very afraid of asking this kind of basic question but I'm waiting for some solutions.
Sorry for my bad English.
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- Read the whole issue, then the project's contributing guide.
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Research direction
Start with the RFpeptides Google Colab workflow and locate where inference.cyclic and inference.cyc_chains are configured. Determine which inputs or cells should contain these flags, then verify that a macrocyclic peptide design run completes successfully.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics, machine-learning
- Issue type
- Documentation
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100