RosettaCommons / RosettaCommons/RFdiffusion
Empty conda environment
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Description
After following this part of the installation (see below) my conda env SE3nv has nothing installed in it (as shown by conda list when SE3nv is activated). If I try to run RFDiffusion in this conda env I get ModuleNotFoundError. What could be going wrong during the conda env setup?
conda env create -f env/SE3nv.yml
conda activate SE3nv
cd env/SE3Transformer
pip install --no-cache-dir -r requirements.txt
python setup.py install
cd ../.. # change into the root directory of the repository
pip install -e . # install the rfdiffusion module from the root of the repository
Thanks!
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start with env/SE3nv.yml, then inspect env/SE3Transformer/requirements.txt and setup.py alongside the installation commands in the issue. Reproduce the setup in a clean environment and check conda list after activation and whether the root editable install exposes the RFdiffusion module. Done means identifying the setup failure and documenting or correcting the affected installation step.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- tooling
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100