RosettaCommons / RosettaCommons/RFdiffusion
FileNotFoundError: [Errno 2] No such file or directory: 'outputs/traj/test_0_pX0_traj.pdb'
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Description
Hi there,
I am trying to diffuse a binder of length 20 to the X chain of the protein "2O26."
But I can't seem to get around this error. If this is an issue within the PDB file, I would appreciate some pointers in how to start identifying it.
Thank you in advance.
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First steps
- Read the whole issue, then the project's contributing guide.
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Research direction
Start by reproducing the reported RFdiffusion run for PDB 2O26, chain X, with a binder length of 20, and inspect where outputs/traj/test_0_pX0_traj.pdb is expected to be created. Determine whether the missing file results from the input PDB configuration or from output generation; done means identifying the cause and documenting a reproducible resolution.
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Assessment
- Tech stack
- python
- Domain
- bioinformatics, machine-learning
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100