RosettaCommons / RosettaCommons/RFdiffusion

GCC dependency

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Dominant language
Python
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Description

Hi,

Thank you for yor work, I used and could use the program. However, when I am now trying to use I get a dependency problem about :
"ImportError: /usr/local/GCC/8.5.0/lib64/libstdc++.so.6: version `GLIBCXX_3.4.26' not found (required by /vf/users/../conda/envs/SE3nv/lib/python3.9/site-packages/scipy/linalg/_matfuncs_sqrtm_triu.cpython-39-x86_64-linux-gnu.so)"

I removed and installed conda environment again but I still have the same problem.

Do you have any idea, what is going on there, how can I use the program again?
Best
Safa

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reproducing the reported failure in the conda environment and inspect the GCC libstdc++ version against the scipy binary's GLIBCXX_3.4.26 requirement. No source files or tests are named; the issue is done when the RFdiffusion program runs successfully in a documented environment.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
devops
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
15/100

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