RosettaCommons / RosettaCommons/PyRosetta.notebooks
Running PyRosetta on Google Colab
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- Dominant language
- Jupyter Notebook
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Description
Is there a new code for initializing PyRosetta on Google Colab?
I keep receiving an error that it is already mounted, so then I told it to force re-mount and then I get an error about the %%time, and then I get an error about Python 3.7
Everything was working a couple of months ago, so just wanted to check to see if there is some update I am unaware of.
Thank you!
Contributor guide
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reproducing the PyRosetta initialization in Google Colab and inspect the notebook setup cells related to mounting, %%time, and Python 3.7. Done means the documented initialization works in the current Colab environment without those reported errors; no specific notebook file or test is named in the issue.
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Assessment
- Tech stack
- jupyter-notebook, python
- Domain
- cloud, developer-experience
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100