RosettaCommons / RosettaCommons/PyRosetta.notebooks
Conda release of 2024.42+release.3366cf78a3-py311_0 requires GLIBC_2.27
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- Dominant language
- Jupyter Notebook
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Description
The newest release of pyrosetta through conda install will load 2024.42+release.3366cf78a3-py311_0, which appears to have been built on the GNU libc 2.27. This causes an import error on my university's cluster ((GNU libc) 2.17) when trying to import pyrosetta.rosetta. I fixed it by conda installing an earlier version (2023.14+release.7132bdc-py311_0), but there isn't clear documentation as to which GNU libc matches which pyrosetta release.
Contributor guide
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing the PyRosetta Conda installation guidance and the release versions mentioned in the issue, especially 2024.42+release.3366cf78a3-py311_0 and 2023.14+release.7132bdc-py311_0. Document which GNU libc versions are compatible with each release and explain how users on older cluster systems can select a compatible package; done means the mapping and workaround are clear.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- jupyter-notebook, python
- Domain
- documentation
- Issue type
- Documentation
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100