[Bug Report] AttributeError: module 'scipy.stats' has no attribute 'gibrat'
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Assessment
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Newbie friendliness
- 30/100
Research direction
Start by reproducing the AttributeError in the Python 3.7 and scipy 1.7.3 environment, then inspect the project's dependency declarations and the descriptastorus reference in descriptastorus/descriptors/dists.py around line 207. Done means AutoTST handles the supported dependency versions without the gibrat/gilbrat failure.
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Description
Describe the bug
The package 'descriptastorus' has had a recent fix in the naming convention for the attribute 'gibrat' - https://github.com/bp-kelley/descriptastorus/blob/86eedc60546abe6f59cdbcb12025a61157ba178d/descriptastorus/descriptors/dists.py#L207C1-L207C1 as in scipy they used to refer it to gilbrat but have since fixed it to be gibrat (notice the removal of the l). This is not reflected n the git repository but there was an upload of a new version, 2.6.0, in the conda-forge channel: https://anaconda.org/conda-forge/descriptastorus. And so, the fix up is included in this version
However, since AutoTST is kept to python 3.7.* (I believe due to RMG), it installs an older version of scipy (1.7.3), whereas descriptastorus is expecting scipy>=1.9.0. and therefore, the older version still maintains the attribute naming convention as gilbrat
- Dominant language
- Python
- Stars
- 51
- Forks
- 19
- PR merge metrics
- No merged PRs in 30d
Contributor guide
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First steps
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- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
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