Project-MONAI / Project-MONAI/MONAI
Unification of auto3dseg algorithm template format and MONAI bundle format
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- Dominant language
- Python
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Description
Following on from this discussion https://github.com/Project-MONAI/MONAILabel/discussions/1630...
Currently, trained auto3dseg models have their own algorithm bundle format, which is different to that of a 'conventional' MONAI bundle as found in the model zoo.
Having two types of 'bundle' is confusing and the documentation isn't very clear on this. At the macro level it does also make me wonder which format will MONAI be using in the longer term. Like a lot of other people I'm keen to standardise my trained models.
It would be great if the two 'bundle' types could be unified, or at least provide a clear differentiation between the two
Thanks
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reading discussion 1630 and comparing the auto3dseg algorithm bundle format with the conventional MONAI bundle format used in the model zoo. Define whether the formats can be unified or need a clear distinction, then update the documentation so users can understand the supported long-term approach.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- documentation, machine-learning
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100