Project-MONAI / Project-MONAI/MONAI

Test error: Distributed call failed in min-dep-os

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#6,696 3 comments 1 reaction 0 assignees View on GitHub

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bug
Dominant language
Python
Stars
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Forks
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Avg merge
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Merged PRs (30d)
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Description

Describe the bug

/Users/runner/work/MONAI/MONAI/monai/transforms/io/array.py:213: UserWarning: required package for reader PILReader is not installed, or the version doesn't match requirement.
Traceback (most recent call last):
  warnings.warn(
  File "/Users/runner/work/MONAI/MONAI/tests/utils.py", line 541, in _wrapper
/Users/runner/work/MONAI/MONAI/monai/transforms/io/array.py:213: UserWarning: required package for reader ITKReader is not installed, or the version doesn't match requirement.
  warnings.warn(
/Users/runner/work/MONAI/MONAI/monai/transforms/io/array.py:213: UserWarning: required package for reader NrrdReader is not installed, or the version doesn't match requirement.
  warnings.warn(
/Users/runner/work/MONAI/MONAI/monai/transforms/io/array.py:213: UserWarning: required package for reader PydicomReader is not installed, or the version doesn't match requirement.
  warnings.warn(
/Users/runner/work/MONAI/MONAI/monai/transforms/utils.py:561: UserWarning: Num foregrounds 27, Num backgrounds 0, unable to generate class balanced samples, setting `pos_ratio` to 1.
  warnings.warn(
    assert results.get(), "Distributed call failed."
AssertionError: Distributed call failed.

To Reproduce

https://github.com/Project-MONAI/MONAI/actions/runs/5455742504/jobs/9927617836?pr=6623

Expected behavior

The test should pass.

Add any other context about the problem here.

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the linked GitHub Actions run and tests/utils.py:541, then locate the distributed test that reaches the results.get() assertion. Reproduce the min-dep-os failure and determine why the distributed call returns false; done means the affected CI test passes reliably.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
ci-cd, testing-qa
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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