PEtab-dev / PEtab-dev/libpetab-python
Add functionality for computing posteriors
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- Dominant language
- Python
- Stars
- 18
- Forks
- 9
- PR merge metrics
- No merged PRs in 30d
Description
So far, we only have functions for computing the likelihood based on some simulation results (calculate_llh_for_table). It would be convenient to also have some corresponding calculate_posterior_for_table function. This should simplify, e.g., https://github.com/PEtab-dev/petab_test_suite/issues/60. Ideally, #311 should be implemented first.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reading the existing calculate_llh_for_table function and reviewing prerequisite issue #311. Determine how a corresponding calculate_posterior_for_table function should fit the current simulation-results workflow; done means the function is available and can simplify the use case described in petab_test_suite issue 60.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100