PEtab-dev / PEtab-dev/libpetab-python

v2 validation: atomize checks

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#289 0 comments 1 reaction 0 assignees View on GitHub

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Dominant language
Python
Stars
18
Forks
9
PR merge metrics
No merged PRs in 30d

Description

#288 introduces a new validation frame work. so far, a lot of v1 code is reused, and many things are checked together. however, it would be preferable to have more fine-grained checks.

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reading issue #288 and the validation framework it introduced, then compare the reused v1 validation code described here. Define the individual checks and their boundaries before changing the validation structure; done means the previously combined checks can be run and reported independently.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
backend
Issue type
Refactor
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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