PEtab-dev / PEtab-dev/PEtab

v2: Add how-tos

Open
#637 1 comment 1 reaction 0 assignees View on GitHub

Nobody has claimed this yet.

documentation
Dominant language
No language data
Stars
66
Forks
16
Avg merge
3h 2m
Merged PRs (30d)
10

Description

I think it would be helpful to have some how-tos for addressing common application problems in PEtab (in additional to the basic tutorial).

Some cases that come to mind:

The simple cases can probably also be addressed in some FAQ section.

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing the basic tutorial and the issue's proposed cases: relative measurements, batch effects, and multiple models with model-specific parameter values. Define the how-to or FAQ scope and document the selected cases with enough guidance for common PEtab application problems; the issue does not name files or tests to run.

Written by the indexing model from the issue text.

Assessment

Domain
documentation
Issue type
Documentation
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.