OpenFreeEnergy / OpenFreeEnergy/openfe

[docs] + [cli] openfe atommapping

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Dominant language
Python
Stars
331
Forks
56
Avg merge
3d 9h
Merged PRs (30d)
13

Description

The CLI has an atommapping option which seems to no longer be advertised in when calling openfe --help.

However it is present in the docs: https://docs.openfree.energy/en/latest/guide/cli/cli_basics.html

  1. Should atommaping be including in the help message? (I haven't seen a commit that specifically seemed to try to remove it)
  2. If yes - let's add it back
  3. If no - let's update the docs accordingly

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by running openfe --help and compare its options with the CLI documentation at https://docs.openfree.energy/en/latest/guide/cli/cli_basics.html. Determine whether atommapping is intended to remain supported, then either make the help output and documentation consistent. Done means the option has the same status and spelling in both places.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
cli, documentation
Issue type
Documentation
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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