OpenFreeEnergy / OpenFreeEnergy/openfe

Konnektor Cli Integration

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#734 1 comment 0 reactions 0 assignees View on GitHub

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Dominant language
Python
Stars
332
Forks
56
Avg merge
3d 9h
Merged PRs (30d)
13

Description

This is about, after Integrating Konnektor to OpenFE, it would be good to give users access to change the NetworkPlanning algorithm using the CLI.
depends on: #249

Todo:

  • Make settings injectable for Konnektor functionality (similar to the Kartograf stuff)
  • Concat / Append Molecules to an existing alchemical network from plan-rbfe

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing the existing Kartograf settings approach and the plan-rbfe CLI entry point, after checking dependency #249. Trace how Konnektor settings are currently provided and how alchemical networks are extended. Done means Konnektor settings are injectable and plan-rbfe can concatenate or append molecules to an existing network.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
cli
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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