OpenFreeEnergy / OpenFreeEnergy/openfe
Retrieve MBAR errors, MBAR overlapping matrix and forward-backward analysis values after RBFE runs
Open
@jthorton is already working on this.
Since Sep 16, 2026.
- Dominant language
- Python
- Stars
- 331
- Forks
- 56
- Avg merge
- 3d 9h
- Merged PRs (30d)
- 13
Description
Hi!
I have done a series of RBFE runs, and most of them are in default OpenFE setup. The jobs provided the figures of MBAR overlapping matrices for me by default, but is it possible to get a data file containing the overlapping values in the MBAR overlapping figures?
Similarly, how can I get the MBAR errors and the values in forward-backward analysis? For the convergence analysis.
Thanks!
Zhengyue
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Assessment
This issue has not been assessed yet.