OpenFreeEnergy / OpenFreeEnergy/ExampleNotebooks

Showcase: Document atom mapping scoring metrics

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Dominant language
Jupyter Notebook
Stars
70
Forks
15
Avg merge
10h 42m
Merged PRs (30d)
2

Description

Can show off different mapping scoring options. Could compare default lomap to karto's RMSD option

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start in the repository's example notebooks and review how the default lomap and karto's RMSD option can be demonstrated. Add a notebook comparison of the available mapping scoring options, with enough output to show how the results differ.

Written by the indexing model from the issue text.

Assessment

Tech stack
jupyter-notebook
Domain
content, documentation
Issue type
Documentation
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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